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For an abstraction on top of LaTeX that makes LaTeX documents a little bit easier to produce and also incorporates a digital notebook concept, check out my software Wyneken at:
Looks nice. In a similar vein, people may be interested in emacs muse:
This is the next-generation version of the absolutely wonderful emacs-wiki mode. It can take your jumbled mess of hyperlinked notes and export them to HTML or PDF via LaTeX.
By the way, I can't get any of the export functions in Wyneken to work. It gives me
Traceback (most recent call last):
File "/usr/bin/wyneken", line 1030, in on_build_to_pdf1_activate
File "/usr/lib/wyneken/pym/config.py", line 24, in parse_config
IOError: [Errno 2] No such file or directory: '/etc/wyneken/wyneken.conf'
The /etc/wyneken directory does not exist and is not mentioned in the installation script. This is the beta version I tried, so I guess I shouldn't complain.